The detailed information of tRNA gene sequence


Sequence ID>WENV170972956
Genome IDMTKY01006092
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3333
End posion on genome 3422
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaagcagtgc
tRNA gene sequence 
GGAGAGGTGACCGAGTGGTCGAAGGTGCACGCCTGGAGAGCGTGTGTAGGGGCAACTCTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gacggattcc
Secondary structure (Cloverleaf model)
>WENV170972956	Ser	GGA
                   c      GCCA gacggattcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G         | | |                 T T
    T       A G G T
      C G A        G     TGTAGGGGCAACTCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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