The detailed information of tRNA gene sequence


Sequence ID>WENV170972957
Genome IDMTKY01006092
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3483
End posion on genome 3572
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atgcgaatac
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTCGATCGGGGCGGTCTCGAAAACCGTTGTACCCGTGAGGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gagatcatcg
Secondary structure (Cloverleaf model)
>WENV170972957	Ser	CGA
                   c      GCCA gagatcatcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      C G A        G     TGTACCCGTGAGGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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