The detailed information of tRNA gene sequence


Sequence ID>WENV170972965
Genome IDMTKY01006478
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2046
End posion on genome 1970
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcacccgggt
tRNA gene sequence 
CGGGGAGTGGCTCAGCCTGGTAGAGCGCACGGTTCGGGTCCGTGAGGTCGGAGGTTCAAA
TCCTCTCTCCCCGACCA
Downstream region at tRNA end position 
ttaccgcatg
Secondary structure (Cloverleaf model)
>WENV170972965	Pro	CGG
                   t      ACCA ttaccgcatg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     A
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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