The detailed information of tRNA gene sequence


Sequence ID>WENV170972974
Genome IDMTKY01006845
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6332
End posion on genome 6257
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cccatcattc
tRNA gene sequence 
AGGGGTGTAGCTCAATTGGCAGAGCGACGGTCTCCAAAACCGTAGGTTGTGGGTTCGATC
CCTACCACCCCTGCCT
Downstream region at tRNA end position 
tgagaactcg
Secondary structure (Cloverleaf model)
>WENV170972974	Trp	CCA
                   c      GCCT tgagaactcg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     C A T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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