The detailed information of tRNA gene sequence


Sequence ID>WENV170972979
Genome IDMTKY01007206
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 337
End posion on genome 259
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ggccgatctc
tRNA gene sequence 
CGGGGTGTAGCTCAGCTTGGTTTAGAGCGCAGCGTTCGGGACGCTGAGGTCGGTGGTTCG
AATCCACTCACCCCGACCA
Downstream region at tRNA end position 
tttttcgacg
Secondary structure (Cloverleaf model)
>WENV170972979	Pro	CGG
                   c      ACCA tttttcgacg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C A C C     A
    T C G A        A      + | | | |     G
  T         C T C G       G G T G G     C
  G         | | | |                 T T
  G         G A G C
    T T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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