The detailed information of tRNA gene sequence


Sequence ID>WENV170972993
Genome IDMTKY01007635
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1253
End posion on genome 1165
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gtggaatcat
tRNA gene sequence 
GCCGAAGTGGCGGAATTGGCAGACGCGCTGGACTCAAACTCCAGTGAGGCTCACACCTCG
TGCGGGTTCGACCCCCGCCTTCGGCACCA
Downstream region at tRNA end position 
cagtacatct
Secondary structure (Cloverleaf model)
>WENV170972993	Leu	CAA
                   t      ACCA cagtacatct
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          C C
                    T     C G C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGAGGCTCACACCTCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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