The detailed information of tRNA gene sequence


Sequence ID>WENV170973001
Genome IDMTKY01007907
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2572
End posion on genome 2499
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctgtgaatat
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGGGGTTCGAAT
CCCCTCAGCTCCACtg
Downstream region at tRNA end position 
tagcggtaga
Secondary structure (Cloverleaf model)
>WENV170973001	Ala	GGC
                   t      ACtg tagcggtaga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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