The detailed information of tRNA gene sequence


Sequence ID>WENV170973003
Genome IDMTKY01007987
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3389
End posion on genome 3296
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aacgattgac
tRNA gene sequence 
GGAGAGATACCGAAGTGGTCATAACGGGACCGACTCGAAATCGGTTTGAGGGCCAAAAGC
TCTCACGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
ttattattgt
Secondary structure (Cloverleaf model)
>WENV170973003	Ser	CGA
                   c      GCCA ttattattgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G G G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TTGAGGGCCAAAAGCTCTCAC
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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