The detailed information of tRNA gene sequence


Sequence ID>WENV170973004
Genome IDMTKY01007987
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3250
End posion on genome 3157
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tatgtttcag
tRNA gene sequence 
GGAGAGATGCCAGAGAGGCCGAATGGGCACGACTGGAAATCGTGTGTGCGCCCCAAAAGG
TGCACCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
gatgtcttcc
Secondary structure (Cloverleaf model)
>WENV170973004	Ser	GGA
                   g      GCCA gatgtcttcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G A C C       G G G G G     C
    G         | | |                 T T
    C       A T G G
      C G A        G     TGTGCGCCCCAAAAGGTGCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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