The detailed information of tRNA gene sequence


Sequence ID>WENV170973029
Genome IDMTKY01009206
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3123
End posion on genome 3208
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acggcacccc
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTCTAAGGCGGCGGTCTTGAAAACCGTTAACCGAAAGGTTCGC
GGGTTCGAATCCTGCTCCCTCCGCCA
Downstream region at tRNA end position 
gatagaaaac
Secondary structure (Cloverleaf model)
>WENV170973029	Ser	TGA
                   c      GCCA gatagaaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TAACCGAAAGGTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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