The detailed information of tRNA gene sequence


Sequence ID>WENV170973032
Genome IDMTKY01009251
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1574
End posion on genome 1497
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cttgacacgc
tRNA gene sequence 
GGAGCCGTGGTGTAGCCTGGTTAACACGCCGGCCTGTCAAGCCGGAGATCGCGGGTTCAA
ATCCCGTCGGTTCCGCCA
Downstream region at tRNA end position 
gatcccgccc
Secondary structure (Cloverleaf model)
>WENV170973032	Asp	GTC
                   c      GCCA gatcccgccc
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
    C C G A        G      + | | | |     A
  T         T G T G       G C G G G     C
  G         | | | |                 T T
  G         A C A C
    T T A          G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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