The detailed information of tRNA gene sequence


Sequence ID>WENV170973036
Genome IDMTKY01009594
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2019
End posion on genome 1943
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gttgttgcat
tRNA gene sequence 
GGCCCCGTGGCGCAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCCGGTTCGAG
TCCGGTCGGGGTCGCCA
Downstream region at tRNA end position 
ccttgaaagt
Secondary structure (Cloverleaf model)
>WENV170973036	Asp	GTC
                   t      GCCA ccttgaaagt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T G G C C     A
      T G A        G      + | | | |     G
    T       C G C G       G C C G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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