The detailed information of tRNA gene sequence


Sequence ID>WENV170973038
Genome IDMTKY01009597
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1387
End posion on genome 1313
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ccgttgcctt
tRNA gene sequence 
GCCGAGATAGCTCAGTCCGGTAGAGCAGTGGACTGAAAATCCATGTGTCCCCAGTTCGAT
TCTGGGTCTCGGCACtc
Downstream region at tRNA end position 
ggcatccaat
Secondary structure (Cloverleaf model)
>WENV170973038	Phe	GAA
                   t      ACtc ggcatccaat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T T
                    T     G G G T C     A
      T G A        A      | | | | |     G
    C       C T C G       C C C A G     C
    C       | | | |                 T T
    G       G A G C
      G T A        A     GTGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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