The detailed information of tRNA gene sequence


Sequence ID>WENV170973049
Genome IDMTKY01010390
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4571
End posion on genome 4643
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
caacacccac
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCGTGAGTTCGACT
CTCATCGGCTCCAgtt
Downstream region at tRNA end position 
ccgtaaggcc
Secondary structure (Cloverleaf model)
>WENV170973049	Ala	GGC
                   c      Agtt ccgtaaggcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T C
                    T     T A C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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