The detailed information of tRNA gene sequence


Sequence ID>WENV170973070
Genome IDMTKY01011305
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 287
End posion on genome 211
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cccccatcgc
tRNA gene sequence 
GCGGTGGTAGCTCAGTTGGTTAGAGTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCCACCGCGCCA
Downstream region at tRNA end position 
gtttcccctc
Secondary structure (Cloverleaf model)
>WENV170973070	Asp	GTC
                   c      GCCA gtttcccctc
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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