The detailed information of tRNA gene sequence


Sequence ID>WENV170973075
Genome IDMTKY01011580
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1695
End posion on genome 1769
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcacccacat
tRNA gene sequence 
TGCGGGGTGGAGCAGTGGCAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAATC
CTCCCTCCGCTACAA
Downstream region at tRNA end position 
agaacacacc
Secondary structure (Cloverleaf model)
>WENV170973075	Met	CAT
                   t      ACAA agaacacacc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C C T C C     A
        G A        G      | | | | |     G
      T     C G A G       G G A G G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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