The detailed information of tRNA gene sequence


Sequence ID>WENV170973102
Genome IDMTKY01012348
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1711
End posion on genome 1635
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aggcgccagc
tRNA gene sequence 
AGGGGCGTAGCTCAATTTGGCAGAGCAACGGTCTCCAAAACCGTAGGTTGTCGGTTCGAG
TCCGGCCGCCCCTGCCA
Downstream region at tRNA end position 
gtccgatgca
Secondary structure (Cloverleaf model)
>WENV170973102	Trp	CCA
                   c      GCCA gtccgatgca
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C G G C C     A
      T A A        A      | + | | |     G
    T       C T C G       G T C G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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