The detailed information of tRNA gene sequence


Sequence ID>WENV170973122
Genome IDMTKY01013191
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1592
End posion on genome 1503
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gttcgcgacg
tRNA gene sequence 
GGAAGGGTGGCCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGTGGGCGCAAGTTCA
CCGTGGGTTCGAATCCCACCTCTTCCGCCA
Downstream region at tRNA end position 
gatcaggctc
Secondary structure (Cloverleaf model)
>WENV170973122	Ser	TGA
                   g      GCCA gatcaggctc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTGGGCGCAAGTTCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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