The detailed information of tRNA gene sequence


Sequence ID>WENV170973134
Genome IDMTKY01014020
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1137
End posion on genome 1063
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gcacgttcag
tRNA gene sequence 
GGGCGATTGGCGCAGTGGGAGCGCGCCTCGTTCACACCGAGGAGGTCACTGGTTCAAATC
CAGTATCGCCCACCA
Downstream region at tRNA end position 
ctctgctcca
Secondary structure (Cloverleaf model)
>WENV170973134	Val	CAC
                   g      ACCA ctctgctcca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G A C C     A
        G A        G      | | | | |     A
      T     C G C G       A C T G G     C
      G     | | | |                 T T
      G     G C G C
        G A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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