The detailed information of tRNA gene sequence


Sequence ID>WENV170973149
Genome IDMTKY01014914
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2989
End posion on genome 2898
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggcgttgttt
tRNA gene sequence 
GGAGGGGTGGCTGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGGGTCGCTGACGCGG
CCCCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
gaattcggcc
Secondary structure (Cloverleaf model)
>WENV170973149	Ser	TGA
                   t      GCCA gaattcggcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     TGGGTCGCTGACGCGGCCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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