The detailed information of tRNA gene sequence


Sequence ID>WENV170973156
Genome IDMTKY01015553
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 606
End posion on genome 531
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
acggtcgccc
tRNA gene sequence 
GGGGCTATGGCGCAGTTGGTAGCGCGACTCGTTCGCATCGAGTAGGTCGGGAGTTCGATT
CTCCCTAGCTCCACCA
Downstream region at tRNA end position 
caatatgtag
Secondary structure (Cloverleaf model)
>WENV170973156	Ala	CGC
                   c      ACCA caatatgtag
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T T
                    T     C C C T C     A
      T G A        G      | | | | |     G
    T       C G C G       G G G A G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    A - T
                    C - G
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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