The detailed information of tRNA gene sequence


Sequence ID>WENV170973159
Genome IDMTKY01016055
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2771
End posion on genome 2679
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggcccgccac
tRNA gene sequence 
GGAGGGGTGGCTGAGTGGTTTAAGGCGCACGACTCGAAATCGTGAGTGCTGTGAAGAACG
GCACCGTGGGTTCAAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
cgattcctgt
Secondary structure (Cloverleaf model)
>WENV170973159	Ser	CGA
                   c      GCCA cgattcctgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G T C G       G T G G G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     AGTGCTGTGAAGAACGGCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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