The detailed information of tRNA gene sequence


Sequence ID>WENV170973175
Genome IDMTKY01016872
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1751
End posion on genome 1676
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
accatttttt
tRNA gene sequence 
GGGATTTTAGCTCAGCAGGGAGAGCACCTGCTTCACACGCAGGGGGTCGTCGGTTCAAGT
CCGGCAAATCCCACCA
Downstream region at tRNA end position 
tccgcgaaac
Secondary structure (Cloverleaf model)
>WENV170973175	Val	CAC
                   t      ACCA tccgcgaaac
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     T - A
                     T - A          T G
                    T     C G G C C     A
      C G A        A      | + | | |     A
    A       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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