The detailed information of tRNA gene sequence


Sequence ID>WENV170973178
Genome IDMTKY01017038
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 827
End posion on genome 901
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agctgcattt
tRNA gene sequence 
GGCGCTATAGCTCAGTGGTAGAGCGAGGGACTCATAAGCCCTAGGTCGCTGGTTCAAATC
CAGCTGGCGCCACCA
Downstream region at tRNA end position 
aaaagacaag
Secondary structure (Cloverleaf model)
>WENV170973178	Met	CAT
                   t      ACCA aaaagacaag
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     A - T          T A
                    T     C G A C C     A
        G A        A      | | | | |     A
      T     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    A - T
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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