The detailed information of tRNA gene sequence


Sequence ID>WENV170973180
Genome IDMTKY01017254
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2231
End posion on genome 2156
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ggcggcgtgc
tRNA gene sequence 
GGGGCCATGGCGCAATTGGTAGCGCACCGCTTTTGCAAGGCGGGGGTTAGGGGTTCGAGT
CCCCTTGGCTCCACCC
Downstream region at tRNA end position 
cacgcacaag
Secondary structure (Cloverleaf model)
>WENV170973180	Ala	TGC
                   c      ACCC cacgcacaag
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T G
                    T     T C C C C     A
      T A A        G      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    T + G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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