The detailed information of tRNA gene sequence


Sequence ID>WENV170973194
Genome IDMTKY01018513
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 164
End posion on genome 88
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cggtcgttga
tRNA gene sequence 
GGGTGCGTGGCTCAGCTGGTTAGAGCGCACGGTTCACATCCGTGAGGTCGGGGGTTCGAG
TCCCTCCGCGCCCACCT
Downstream region at tRNA end position 
ggatcgagag
Secondary structure (Cloverleaf model)
>WENV170973194	Val	CAC
                   a      ACCT ggatcgagag
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      C G A        G      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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