The detailed information of tRNA gene sequence


Sequence ID>WENV170973205
Genome IDMTKY01019252
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1315
End posion on genome 1239
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gaaggcctgt
tRNA gene sequence 
CGGGGTGTAGCGCAGTCTGGTAGCGCACCTGCTTTGGGAGCAGGGGGTCGTCAGTTCGAA
TCTGACCTCCCCGACCA
Downstream region at tRNA end position 
acgccttctc
Secondary structure (Cloverleaf model)
>WENV170973205	Pro	TGG
                   t      ACCA acgccttctc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T A
                    T     C A G T C     A
      T G A        A      | | | | |     G
    C       C G C G       G T C A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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