The detailed information of tRNA gene sequence


Sequence ID>WENV170973208
Genome IDMTKY01019396
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 987
End posion on genome 1074
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctctcccgcc
tRNA gene sequence 
GGAGGGGTGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGGCCCGCAAGGGCCC
AGGGGTTCGAATCCCCTCCCCTCCGCCA
Downstream region at tRNA end position 
gcggccagtg
Secondary structure (Cloverleaf model)
>WENV170973208	Ser	TGA
                   c      GCCA gcggccagtg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       A G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGGCCCGCAAGGGCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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