The detailed information of tRNA gene sequence


Sequence ID>WENV170973214
Genome IDMTKY01020083
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 453
End posion on genome 360
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agcgccttcc
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTATACGGGCTACAACC
TGTATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
ccccctcccc
Secondary structure (Cloverleaf model)
>WENV170973214	Ser	GCT
                   c      GCCA ccccctcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGGCTACAACCTGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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