The detailed information of tRNA gene sequence


Sequence ID>WENV170973220
Genome IDMTKY01020403
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2610
End posion on genome 2537
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
accagtttgg
tRNA gene sequence 
GGCCTCGTGGCGGAGTGGCTACGCAGAGGACTGCAAATCCTTGTACGGGGGTTCGATTCC
CTCCGAGGCCTCCA
Downstream region at tRNA end position 
aaaccgggcg
Secondary structure (Cloverleaf model)
>WENV170973220	Cys	GCA
                   g      TCCA aaaccgggcg
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     C T C C C     A
        G A        G      | + | | |     G
      T     G G C G       G G G G G     C
      G       | | |                 T T
      G     A C G C
        C T        A     GTAC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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