The detailed information of tRNA gene sequence


Sequence ID>WENV170973223
Genome IDMTKY01020555
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 240
End posion on genome 166
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tcgtcggtga
tRNA gene sequence 
GGGTGAGTAGCTCAGTCGGTTAGAGCGCACGGTTCACATCCGTGAGGTCCAGAGTTCGAG
TCTCTGCTCGCCCACac
Downstream region at tRNA end position 
agccccggct
Secondary structure (Cloverleaf model)
>WENV170973223	Val	CAC
                   a      ACac agccccggct
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     A - T
                     G - C          T G
                    T     G T C T C     A
      T G A        A      | | | | |     G
    C       C T C G       C A G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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