The detailed information of tRNA gene sequence


Sequence ID>WENV170973229
Genome IDMTKY01021010
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 758
End posion on genome 682
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgccccttgt
tRNA gene sequence 
CGGAACGTAGCGCAGCCTGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCGCGAGTTCGAA
TCCCGCCGTTCCGACCA
Downstream region at tRNA end position 
ccgttttgtc
Secondary structure (Cloverleaf model)
>WENV170973229	Pro	TGG
                   t      ACCA ccgttttgtc
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | |   |     G
    C       C G C G       G C G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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