The detailed information of tRNA gene sequence


Sequence ID>WENV170973231
Genome IDMTKY01021048
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2173
End posion on genome 2262
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tggccctgtc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTCGATGGCAGCGGTCTTGAAAACCGCCAGCGGGGCGACCCGC
TCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
ttcttcccgc
Secondary structure (Cloverleaf model)
>WENV170973231	Ser	TGA
                   c      GCCA ttcttcccgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G       + | | |                 T T
    T       T G G C
      C G A        A     CAGCGGGGCGACCCGCTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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