The detailed information of tRNA gene sequence


Sequence ID>WENV170973232
Genome IDMTKY01021060
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1114
End posion on genome 1027
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctcgtccgc
tRNA gene sequence 
GGAGGATTCGCATAGTGGCCTAGTGCGCTCGCTTGGAAAGCGGGTTGAGTGAAAGCTCTC
AGGGGTTCGAATCCCCTATCCTCCGCCA
Downstream region at tRNA end position 
atgtgccttg
Secondary structure (Cloverleaf model)
>WENV170973232	Ser	GGA
                   c      GCCA atgtgccttg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T A C G       A G G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTGAGTGAAAGCTCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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