The detailed information of tRNA gene sequence


Sequence ID>WENV170973237
Genome IDMTKY01021422
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2306
End posion on genome 2231
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tctctccggt
tRNA gene sequence 
GGGGTCATAGCTCAGATGGGAGAGCGCTTGAATGGCATTCAAGAGGTCGGGAGTTCGATC
CTCCCTGGCTCCACCA
Downstream region at tRNA end position 
aagagagact
Secondary structure (Cloverleaf model)
>WENV170973237	Ala	GGC
                   t      ACCA aagagagact
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     C - G
                     A - T          C T
                    T     C C C T C     A
      A G A        A      | | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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