The detailed information of tRNA gene sequence


Sequence ID>WENV170973242
Genome IDMTKY01021969
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1467
End posion on genome 1381
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tgtaggggcc
tRNA gene sequence 
GGGCGAGTGGTGGAATTGGCAGACACGCTAGGTTCAGGGTCTAGTGCGCGTACGCGCATG
CGGGTTCAAGTCCCGCCTCGCCCACCA
Downstream region at tRNA end position 
tttccgacgg
Secondary structure (Cloverleaf model)
>WENV170973242	Leu	CAG
                   c      ACCA tttccgacgg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    T       G G T G       G C G G G     C
    G         | | |                 T T
    G       A C A C
      C A G        G     TGCGCGTACGCGCAT
                    C - G
                    T - A
                    A - T
                    G - C
                    G + T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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