The detailed information of tRNA gene sequence


Sequence ID>WENV170973268
Genome IDMTKY01023210
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 187
End posion on genome 279
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcccccgcgc
tRNA gene sequence 
GGAGAAGTGGCCGAGTGGCTGAAGGCAACCGCCTGCTAAGCGGTTAAGGGGTGACAAGCT
CCTTCCCGGGTTCGAATCCCGGCTTCTCCGCCA
Downstream region at tRNA end position 
gcttccggcc
Secondary structure (Cloverleaf model)
>WENV170973268	Ser	GCT
                   c      GCCA gcttccggcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C C G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     TAAGGGGTGACAAGCTCCTTC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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