The detailed information of tRNA gene sequence


Sequence ID>WENV170973277
Genome IDMTKY01024320
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1719
End posion on genome 1646
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttcgtcgact
tRNA gene sequence 
GGGGGTATAGCTCAGTTGGGAGAGCGTCGCGTTCGCATCGCGAAGGCCAGGGGTTCGAAT
CCCCTTACCTCCACtt
Downstream region at tRNA end position 
gcggcaccgc
Secondary structure (Cloverleaf model)
>WENV170973277	Ala	CGC
                   t      ACtt gcggcaccgc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    T - A
                    C - G
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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