The detailed information of tRNA gene sequence


Sequence ID>WENV170973284
Genome IDMTKY01025199
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 839
End posion on genome 915
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcttcgatgc
tRNA gene sequence 
GCGGGTGTAGCTCAGTCGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
tttttttctt
Secondary structure (Cloverleaf model)
>WENV170973284	Asp	GTC
                   c      GCCA tttttttctt
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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