The detailed information of tRNA gene sequence


Sequence ID>WENV170973307
Genome IDMTKY01026676
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 414
End posion on genome 487
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
actgtagcgg
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTAGAGCTCCAGCCTTCCAAGCTGGTTGTCGCGGGTTCGAGT
CCCGTCGCCCGCTCtt
Downstream region at tRNA end position 
tgtcacgccc
Secondary structure (Cloverleaf model)
>WENV170973307	Gly	TCC
                   g      TCtt tgtcacgccc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          T     TTGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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