The detailed information of tRNA gene sequence


Sequence ID>WENV170973309
Genome IDMTKY01026693
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 630
End posion on genome 554
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgaggcggac
tRNA gene sequence 
AGGCCAGTAGCTCAATTTGGCAGAGCACCGGTCTCCAAAACCGGTTGTTGGGGGTTCAAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
accgggagag
Secondary structure (Cloverleaf model)
>WENV170973309	Trp	CCA
                   c      GCCA accgggagag
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     TTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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