The detailed information of tRNA gene sequence


Sequence ID>WENV170973310
Genome IDMTKY01026695
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1163
End posion on genome 1253
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agcgtcgctC
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTGAATGCGGCGGTCTCGAAAACCGTTGGGCCGCGCAAGCGG
TCCCGGGGGTTCGAATCCCCCCCTCTCCGTtc
Downstream region at tRNA end position 
atttgcaggg
Secondary structure (Cloverleaf model)
>WENV170973310	Ser	CGA
                   C      GTtc atttgcaggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TGGGCCGCGCAAGCGGTCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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