The detailed information of tRNA gene sequence


Sequence ID>WENV170973323
Genome IDMTKY01027534
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 107
End posion on genome 195
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ctctctcgct
tRNA gene sequence 
GCCGAAGTGGCGGAACTGGCAGACGCGCCGGACTCAAAATCCGGTCCCGTTCACGCGGGG
TGCGGGTTCGACCCCCGCCTTCGGCACCA
Downstream region at tRNA end position 
atcttggccg
Secondary structure (Cloverleaf model)
>WENV170973323	Leu	CAA
                   t      ACCA atcttggccg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          C C
                    T     C G C C C     A
      C A A        G      | | | | |     G
    T       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TCCCGTTCACGCGGGGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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