The detailed information of tRNA gene sequence


Sequence ID>WENV170973329
Genome IDMTKY01028306
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 486
End posion on genome 573
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taggtctgct
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTTGATCGGGGCGCTCTCGAAAAGCGTTGTGGCTGTGAGGTCA
CCGTGGGTTCGAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
taagccccag
Secondary structure (Cloverleaf model)
>WENV170973329	Ser	CGA
                   t      GCtg taagccccag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       +   | |                 T T
    T       T C G G
      T G A        G     TGTGGCTGTGAGGTCACC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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