The detailed information of tRNA gene sequence


Sequence ID>WENV170973333
Genome IDMTKY01028628
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 422
End posion on genome 494
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcttgtcat
tRNA gene sequence 
TGCGGGGTAGAGCAGAGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGTGGGTTCAATTC
CCACCCCCGCTACtc
Downstream region at tRNA end position 
tgtataaccc
Secondary structure (Cloverleaf model)
>WENV170973333	Met	CAT
                   t      ACtc tgtataaccc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     C A C C C     A
        G A        A      | | | | |     A
      A     C G A G       G T G G G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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