The detailed information of tRNA gene sequence


Sequence ID>WENV170973343
Genome IDMTKY01029257
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 84
End posion on genome 160
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcttagtcgc
tRNA gene sequence 
GGGGGCGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCGCTCCCGCCT
Downstream region at tRNA end position 
cgcggatggc
Secondary structure (Cloverleaf model)
>WENV170973343	Asp	GTC
                   c      GCCT cgcggatggc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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