The detailed information of tRNA gene sequence


Sequence ID>WENV170973347
Genome IDMTKY01029846
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1300
End posion on genome 1211
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccagtcccT
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTATGGCGCTCGCCTGGAACGCGGGTTGGGTTAATAGCCCT
CAGGGGTTCGAATCCCCTATCCTCCGCCC
Downstream region at tRNA end position 
tcggtgatgg
Secondary structure (Cloverleaf model)
>WENV170973347	Ser	GGA
                   T      GCCC tcggtgatgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C C G       A G G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGTTAATAGCCCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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