The detailed information of tRNA gene sequence


Sequence ID>WENV170973357
Genome IDMTKY01031233
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1278
End posion on genome 1202
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caggcaccgc
tRNA gene sequence 
GGGCCCGTAGCTCAGTTGGTCAGAGCAGAGGACTCATAATCCTCGGGTCGCTGGTTCGAG
CCCAGCCGGGCCCACCA
Downstream region at tRNA end position 
tccaagacgt
Secondary structure (Cloverleaf model)
>WENV170973357	Met	CAT
                   c      ACCA tccaagacgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C G
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GGGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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