The detailed information of tRNA gene sequence


Sequence ID>WENV170973377
Genome IDMTKY01034272
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 539
End posion on genome 625
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cgccactcat
tRNA gene sequence 
GGGCGAGTGGCGGAATTGGCAGACGCGCTAGGTTCAGGGTCTAGTGAGCTTACGCTCATG
CGGGTTCAAGTCCCGCCTCGCCCACCA
Downstream region at tRNA end position 
tcatcgtccc
Secondary structure (Cloverleaf model)
>WENV170973377	Leu	CAG
                   t      ACCA tcatcgtccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGAGCTTACGCTCAT
                    C - G
                    T - A
                    A - T
                    G - C
                    G + T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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