The detailed information of tRNA gene sequence


Sequence ID>WENV170973378
Genome IDMTKY01034279
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 343
End posion on genome 256
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tacgtttttt
tRNA gene sequence 
GGAGCGATGGGTGAGAGGCTTAAACCAGCAGTTTGCTAAACTGCCGTACGGGTGACCGTA
CCGGGGGTTCGAATCCCCCTCTCTCCGCat
Downstream region at tRNA end position 
aagaaaaagc
Secondary structure (Cloverleaf model)
>WENV170973378	Ser	GCT
                   t      GCat aagaaaaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     C   T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTACGGGTGACCGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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